BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C11LP1|AL429371
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 1955 0.0
>3x_Contig1496
Length = 9544
Score = 1955 bits (985), Expect = 0.0
Identities = 1004/1009 (99%), Gaps = 2/1009 (0%)
Strand = Plus / Plus
Query: 1 attatggaaatgatttcaacactattcctgcggcaattaacaacacggatgttccagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 attatggaaatgatttcaacactattcctgcggcaattaacaacacggatgttccagttg 1360
Query: 61 gaagtaatagtaacttgtcaggtaacagaacggaagcactcgggcattatggacatgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 gaagtaatagtaacttgtcaggtaacagaacggaagcactcgggcattatggacatgtgc 1420
Query: 121 tgtcgaccatatcacaggatccaaagtccaattggcaaaatcggtcatctaggggaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 tgtcgaccatatcacaggatccaaagtccaattggcaaaatcggtcatctaggggaacca 1480
Query: 181 aggattgtttaaataatttaaaaagctcgcaaactacgccaagttcaagctcaaagccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 aggattgtttaaataatttaaaaagctcgcaaactacgccaagttcaagctcaaagccca 1540
Query: 241 atacacaatttgatgtaaaamaggaattcactcctatggaacttaatgcgtcaaagaggt 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 atacacaatttgatgtaaaaaaggaattcactcctatggaacttaatgcgtcaaagaggt 1600
Query: 301 tacaaagtgatatcaaccaaggaacatataaactaccaaagtacggaagtgtgccggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 tacaaagtgatatcaaccaaggaacatataaactaccaaagtacggaagtgtgccggcat 1660
Query: 361 ttgttttccctactcttatgtttggacaagagcatacaaatgagaatagtgccgctactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 ttgttttccctactcttatgtttggacaagagcatacaaatgagaatagtgccgctactc 1720
Query: 421 ctgccgcaacttttgagaaagcttttcctgtcctgaatcaatcacagcctcagatccagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 ctgccgcaacttttgagaaagcttttcctgtcctgaatcaatcacagcctcagatccagg 1780
Query: 481 agtttgttccagaacaaatattcgttgatctacaccgatgtgagattgagcagttggcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 agtttgttccagaacaaatattcgttgatctacaccgatgtgagattgagcagttggcgc 1840
Query: 541 a-ctaaagttagggtctacaggaaaaatgccctcttttcatctgacaatggaattgcttg 599
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 agctaaagttagggtctacaggaaaaatgccctcttttcatctgacaatggaattgcttg 1900
Query: 600 atttatactatgagttcgttcacccaaaggtcaaagttctacctccgaaagaggtaatga 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 atttatactatgagtacgttcacccaaaggtcaaagttctacctccgaaagaggtaatga 1960
Query: 660 aacggatctcactctcacaaacaaatacaagtttgacttatgctatatttctatgcgcca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 aacggatctcactctcacaaacaaatacaagtttgacttatgctatatttctatgcgcca 2020
Query: 720 tacctctgacttctttaaaaaacaagacaaaacttagcgaatcaggcttcttaccaacca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 tacctctgacttctttaaaaaacaagacaaaacttagcgaatcaggcttcttaccaacca 2080
Query: 780 tgtctgattgtctaagagaaatttctactcattgggaagaacttgattttattggaactt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 tgtctgattgtctaagagaaatttctactcattgggaagaacttgattttattggaactt 2140
Query: 840 tacaaactcttaatatcttggtttatcactcgatatttatccaaatgaatagtcggttaa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 tacaaactcttaatatcttggtttatcactcgatatttatccaaatgaatagtcggttaa 2200
Query: 900 ctgctatgcatctagagaaacttttgaagactattgcatatagcaatatcgtcggacaaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2201 ctgctatgcatctagagaaacttttgaagactattgcatatagcaatatcgtcggac-aa 2259
Query: 960 tatcgtaatggccctaacctcgaggagktctttactttttcgaccaata 1008
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2260 tatcgtaatggccctaacctcgaggagttctttactttttcgaccaata 2308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6834
Number of Sequences: 1807
Number of extensions: 6834
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)